Actually I may have found a way to do this, not sure how repeatable but looking at the files in GerbMagic, it seems to work ok.

Open the board file without the schematic.
Make sure all layers, etc are active
select all, then cut to the paste buffer
Edit--> paste brings up a new copy of the board and just place where you want it to be in the "panel"

Of course the schematic is now no longer associated and you need to remember to rename the panel board file else your original is gone....


      
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